STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN43666.1Hypothetical protein. (611 aa)    
Predicted Functional Partners:
CDN43667.1
Hypothetical protein.
 
  0.916
CDN43280.1
ABC transporter, solute-binding protein; Product derived from UniProtKB/Trembl:F5LEN2.
  
  0.865
CDN42240.1
ABC transporter, solute-binding protein; Product derived from UniProtKB/Trembl:F5LQ26.
  
  0.835
CDN44171.1
Hypothetical protein.
  
  0.820
yteP-2
Uncharacterized multiple-sugar transport system permease YteP; Product derived from UniProtKB/Swiss-Prot:C0SPB3;Gene name derived from UniProtKB/Swiss-Prot:C0SPB3.
  
 
0.815
CDN44951.1
Extracellular solute-binding protein, family 1; Product derived from UniProtKB/Trembl:C6IZN4.
 
  0.814
CDN44709.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:I0BKJ6.
 
  0.813
CDN44756.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:E0IFB7.
 
  0.787
yesP-4
Probable ABC transporter permease protein YesP; Product derived from UniProtKB/Swiss-Prot:O31519;Gene name derived from UniProtKB/Swiss-Prot:O31519.
  
  0.775
CDN45302.1
Extracellular solute-binding protein family 1; Product derived from UniProtKB/Trembl:E0IBG9.
   
  0.764
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.