Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDN43888.1 | CDN43890.1 | BN871_DT_00020 | BN871_DT_00040 | Hypothetical protein. | Hypothetical protein. | 0.773 |
CDN43888.1 | CDN43892.1 | BN871_DT_00020 | BN871_DT_00060 | Hypothetical protein. | Hypothetical protein. | 0.413 |
CDN43888.1 | cotJB | BN871_DT_00020 | BN871_DT_00030 | Hypothetical protein. | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | 0.773 |
CDN43888.1 | cotJC | BN871_DT_00020 | BN871_DT_00010 | Hypothetical protein. | Protein CotJC; Product derived from UniProtKB/Swiss-Prot:Q45538;Gene name derived from UniProtKB/Swiss-Prot:Q45538. | 0.565 |
CDN43888.1 | pbpF-2 | BN871_DT_00020 | BN871_DT_00050 | Hypothetical protein. | Penicillin-binding protein 1F; Product derived from UniProtKB/Swiss-Prot:P38050;Gene name derived from UniProtKB/Swiss-Prot:P38050. | 0.413 |
CDN43890.1 | CDN43888.1 | BN871_DT_00040 | BN871_DT_00020 | Hypothetical protein. | Hypothetical protein. | 0.773 |
CDN43890.1 | CDN43892.1 | BN871_DT_00040 | BN871_DT_00060 | Hypothetical protein. | Hypothetical protein. | 0.413 |
CDN43890.1 | cotJB | BN871_DT_00040 | BN871_DT_00030 | Hypothetical protein. | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | 0.987 |
CDN43890.1 | cotJC | BN871_DT_00040 | BN871_DT_00010 | Hypothetical protein. | Protein CotJC; Product derived from UniProtKB/Swiss-Prot:Q45538;Gene name derived from UniProtKB/Swiss-Prot:Q45538. | 0.924 |
CDN43890.1 | pbpF-2 | BN871_DT_00040 | BN871_DT_00050 | Hypothetical protein. | Penicillin-binding protein 1F; Product derived from UniProtKB/Swiss-Prot:P38050;Gene name derived from UniProtKB/Swiss-Prot:P38050. | 0.413 |
CDN43892.1 | CDN43888.1 | BN871_DT_00060 | BN871_DT_00020 | Hypothetical protein. | Hypothetical protein. | 0.413 |
CDN43892.1 | CDN43890.1 | BN871_DT_00060 | BN871_DT_00040 | Hypothetical protein. | Hypothetical protein. | 0.413 |
CDN43892.1 | cotJB | BN871_DT_00060 | BN871_DT_00030 | Hypothetical protein. | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | 0.413 |
CDN43892.1 | pbpF-2 | BN871_DT_00060 | BN871_DT_00050 | Hypothetical protein. | Penicillin-binding protein 1F; Product derived from UniProtKB/Swiss-Prot:P38050;Gene name derived from UniProtKB/Swiss-Prot:P38050. | 0.773 |
cotJB | CDN43888.1 | BN871_DT_00030 | BN871_DT_00020 | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | Hypothetical protein. | 0.773 |
cotJB | CDN43890.1 | BN871_DT_00030 | BN871_DT_00040 | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | Hypothetical protein. | 0.987 |
cotJB | CDN43892.1 | BN871_DT_00030 | BN871_DT_00060 | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | Hypothetical protein. | 0.413 |
cotJB | cotJC | BN871_DT_00030 | BN871_DT_00010 | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | Protein CotJC; Product derived from UniProtKB/Swiss-Prot:Q45538;Gene name derived from UniProtKB/Swiss-Prot:Q45538. | 0.968 |
cotJB | pbpF-2 | BN871_DT_00030 | BN871_DT_00050 | Protein CotJB; Product derived from UniProtKB/Swiss-Prot:Q45537;Gene name derived from UniProtKB/Swiss-Prot:Q45537. | Penicillin-binding protein 1F; Product derived from UniProtKB/Swiss-Prot:P38050;Gene name derived from UniProtKB/Swiss-Prot:P38050. | 0.413 |
cotJC | CDN43888.1 | BN871_DT_00010 | BN871_DT_00020 | Protein CotJC; Product derived from UniProtKB/Swiss-Prot:Q45538;Gene name derived from UniProtKB/Swiss-Prot:Q45538. | Hypothetical protein. | 0.565 |
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