STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN44088.1Uncharacterized isomerase BH1950; Product derived from UniProtKB/Swiss-Prot:Q9KBH7;EC number derived from UniProtKB/Swiss-Prot:Q9KBH7. (301 aa)    
Predicted Functional Partners:
CDN44089.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:I4D009.
       0.677
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.620
ydeE
Uncharacterized HTH-type transcriptional regulator YdeE; Product derived from UniProtKB/Swiss-Prot:P96662;Gene name derived from UniProtKB/Swiss-Prot:P96662.
       0.536
hyuC
Hydantoin utilization protein C; Product derived from UniProtKB/Swiss-Prot:Q01264;Gene name derived from UniProtKB/Swiss-Prot:Q01264;EC number derived from UniProtKB/Trembl:C6CZ13.
  
  
  0.529
CDN45866.1
Hypothetical protein.
  
  
  0.527
CDN44086.1
Hypothetical protein.
       0.487
CDN44087.1
S-layer domain protein; Product derived from UniProtKB/Trembl:E0I9Y2.
       0.487
CDN44977.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:M5P441.
 
  
 0.447
CDN44085.1
Aromatic amino acid beta-eliminating lyase/threonine aldolase; Product derived from UniProtKB/Trembl:G4HAE1.
 
     0.439
yisX
Uncharacterized protein YisX; Product derived from UniProtKB/Swiss-Prot:O06733;Gene name derived from UniProtKB/Swiss-Prot:O06733.
 
     0.421
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.