STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN44686.1Hypothetical protein. (169 aa)    
Predicted Functional Partners:
rlmN-2
Probable dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.492
prpC
Protein phosphatase PrpC; Product derived from UniProtKB/Swiss-Prot:O34779;Gene name derived from UniProtKB/Swiss-Prot:O34779;EC number derived from UniProtKB/Swiss-Prot:O34779.
       0.489
CDN44680.1
Putative uncharacterized protein; Product derived from UniProtKB/Trembl:F8FC22.
       0.485
rpe
Ribulose-phosphate 3-epimerase; Product derived from UniProtKB/Swiss-Prot:O34557;Gene name derived from UniProtKB/Swiss-Prot:O34557;EC number derived from UniProtKB/Swiss-Prot:O34557; Belongs to the ribulose-phosphate 3-epimerase family.
       0.485
rsgA
Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.485
prkC
Serine/threonine-protein kinase PrkC; Product derived from UniProtKB/Swiss-Prot:O34507;Gene name derived from UniProtKB/Swiss-Prot:O34507;EC number derived from UniProtKB/Swiss-Prot:O34507.
       0.485
cgmA
Putative cyclic beta-1,2-glucan modification protein; Product derived from UniProtKB/Swiss-Prot:P72302;Gene name derived from UniProtKB/Swiss-Prot:P72302.
       0.432
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.