STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ykoWSignaling protein YkoW; Product derived from UniProtKB/Swiss-Prot:O34311;Gene name derived from UniProtKB/Swiss-Prot:O34311. (620 aa)    
Predicted Functional Partners:
CDN41373.1
Hypothetical protein.
  
 0.990
CDN45571.1
GAF sensor hybrid histidine kinase; Product derived from UniProtKB/Trembl:F8FLJ0.
  
 0.989
CDN44483.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Product derived from UniProtKB/Trembl:F5LCM9.
 
 0.988
CDN44236.1
Hypothetical protein.
 0.979
CDN46052.1
Hypothetical protein.
 
 
0.974
ykuI
Uncharacterized EAL-domain containing protein YkuI; Product derived from UniProtKB/Swiss-Prot:O35014;Gene name derived from UniProtKB/Swiss-Prot:O35014.
 
 
 0.969
CDN42136.1
Uncharacterized 104.1 kDa protein in hypE 3'region; Product derived from UniProtKB/Swiss-Prot:Q02998.
 
 0.963
CDN43075.1
Multi-sensor hybrid histidine kinase; Product derived from UniProtKB/Trembl:G4HKK5.
  
 
 0.950
CDN43271.1
Response regulator receiver domain protein; Product derived from UniProtKB/Trembl:F5LPU1.
  
 
 0.950
CDN42455.1
Hypothetical protein.
 
 
0.939
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.