STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDN45344.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
yndE
Spore germination protein YndE; Product derived from UniProtKB/Swiss-Prot:O31809;Gene name derived from UniProtKB/Swiss-Prot:O31809.
  
     0.558
CDN45343.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:L0EIJ0.
       0.539
yndF
Spore germination protein YndF; Product derived from UniProtKB/Swiss-Prot:O31810;Gene name derived from UniProtKB/Swiss-Prot:O31810.
  
     0.500
M1_2055
Copper amine oxidase N-terminal domain; Product derived from UniProtKB/Trembl:G0W0X6;Gene name derived from UniProtKB/Trembl:G0W0X6.
  
     0.498
CDN42824.1
Putative uncharacterized protein; Product derived from UniProtKB/Trembl:C6CUA5.
  
     0.425
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.