STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
speHS-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (147 aa)    
Predicted Functional Partners:
CDN43736.1
Hypothetical protein.
  
 
 0.974
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.933
fliN
Flagellar motor switch protein FliN; Product derived from UniProtKB/Trembl:F5LS29;Gene name derived from UniProtKB/Trembl:F5LS29.
   
    0.881
speB
Agmatinase; Product derived from UniProtKB/Swiss-Prot:Q9K6B9;Gene name derived from UniProtKB/Swiss-Prot:Q9K6B9;EC number derived from UniProtKB/Swiss-Prot:Q9K6B9; Belongs to the arginase family.
 
  
 0.814
speA
Arginine decarboxylase; Product derived from UniProtKB/Swiss-Prot:P21885;Gene name derived from UniProtKB/Swiss-Prot:P21885;EC number derived from UniProtKB/Swiss-Prot:P21885.
 
  
 0.683
punA
Purine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.661
yaaO
Uncharacterized protein YaaO; Product derived from UniProtKB/Swiss-Prot:P37536;Gene name derived from UniProtKB/Swiss-Prot:P37536.
 
  
 0.628
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.624
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.598
rocF
Arginase; Product derived from UniProtKB/Swiss-Prot:P53608;Gene name derived from UniProtKB/Swiss-Prot:P53608;EC number derived from UniProtKB/Swiss-Prot:P53608; Belongs to the arginase family.
    
 0.567
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.