STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbB-2dTDP-glucose 4,6-dehydratase; Product derived from UniProtKB/Swiss-Prot:B0RVL0;Gene name derived from UniProtKB/Swiss-Prot:B0RVL0;EC number derived from UniProtKB/Swiss-Prot:B0RVL0. (296 aa)    
Predicted Functional Partners:
rmlA-2
Glucose-1-phosphate thymidylyltransferase; Product derived from UniProtKB/Swiss-Prot:P39629;Gene name derived from UniProtKB/Swiss-Prot:P39629;EC number derived from UniProtKB/Swiss-Prot:P39629.
 
 
 0.989
rmlA
Glucose-1-phosphate thymidylyltransferase; Product derived from UniProtKB/Swiss-Prot:P39629;Gene name derived from UniProtKB/Swiss-Prot:P39629;EC number derived from UniProtKB/Swiss-Prot:P39629.
 
 
 0.974
CDN42250.1
Glycosyl transferase 2 family protein; Product derived from UniProtKB/Trembl:K4ZNE6.
 
 
 0.970
rfbC-2
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 
 0.964
spsK-2
Spore coat polysaccharide biosynthesis protein SpsK; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.951
spsK
Spore coat polysaccharide biosynthesis protein SpsK; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.907
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 
 0.903
CDN46194.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.885
rmd
GDP-6-deoxy-D-mannose reductase; Product derived from UniProtKB/Swiss-Prot:Q6T1X6;Gene name derived from UniProtKB/Swiss-Prot:Q6T1X6;EC number derived from UniProtKB/Swiss-Prot:Q6T1X6.
 
 
 0.829
tuaD
UDP-glucose 6-dehydrogenase TuaD; Product derived from UniProtKB/Swiss-Prot:O32271;Gene name derived from UniProtKB/Swiss-Prot:O32271;EC number derived from UniProtKB/Swiss-Prot:O32271.
  
 
 0.782
Your Current Organism:
Paenibacillus sp. P22
NCBI taxonomy Id: 483908
Other names: P. sp. P22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.