Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDN46178.1 | CDN46179.1 | BN871_LG_00020 | BN871_LG_00030 | Hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | 0.727 |
CDN46178.1 | CDN46180.1 | BN871_LG_00020 | BN871_LG_00040 | Hypothetical protein. | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | 0.727 |
CDN46178.1 | CDN46181.1 | BN871_LG_00020 | BN871_LG_00050 | Hypothetical protein. | Hypothetical protein. | 0.580 |
CDN46178.1 | CDN46182.1 | BN871_LG_00020 | BN871_LG_00060 | Hypothetical protein. | Hypothetical protein. | 0.406 |
CDN46178.1 | yvaA | BN871_LG_00020 | BN871_LG_00010 | Hypothetical protein. | Uncharacterized oxidoreductase YvaA; Product derived from UniProtKB/Swiss-Prot:O32223;Gene name derived from UniProtKB/Swiss-Prot:O32223;EC number derived from UniProtKB/Swiss-Prot:O32223. | 0.773 |
CDN46179.1 | CDN46178.1 | BN871_LG_00030 | BN871_LG_00020 | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.727 |
CDN46179.1 | CDN46180.1 | BN871_LG_00030 | BN871_LG_00040 | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | 0.803 |
CDN46179.1 | CDN46181.1 | BN871_LG_00030 | BN871_LG_00050 | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.615 |
CDN46179.1 | CDN46182.1 | BN871_LG_00030 | BN871_LG_00060 | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.428 |
CDN46179.1 | yvaA | BN871_LG_00030 | BN871_LG_00010 | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | Uncharacterized oxidoreductase YvaA; Product derived from UniProtKB/Swiss-Prot:O32223;Gene name derived from UniProtKB/Swiss-Prot:O32223;EC number derived from UniProtKB/Swiss-Prot:O32223. | 0.727 |
CDN46180.1 | CDN46178.1 | BN871_LG_00040 | BN871_LG_00020 | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | Hypothetical protein. | 0.727 |
CDN46180.1 | CDN46179.1 | BN871_LG_00040 | BN871_LG_00030 | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | 0.803 |
CDN46180.1 | CDN46181.1 | BN871_LG_00040 | BN871_LG_00050 | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | Hypothetical protein. | 0.615 |
CDN46180.1 | CDN46182.1 | BN871_LG_00040 | BN871_LG_00060 | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | Hypothetical protein. | 0.428 |
CDN46180.1 | yvaA | BN871_LG_00040 | BN871_LG_00010 | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | Uncharacterized oxidoreductase YvaA; Product derived from UniProtKB/Swiss-Prot:O32223;Gene name derived from UniProtKB/Swiss-Prot:O32223;EC number derived from UniProtKB/Swiss-Prot:O32223. | 0.727 |
CDN46181.1 | CDN46178.1 | BN871_LG_00050 | BN871_LG_00020 | Hypothetical protein. | Hypothetical protein. | 0.580 |
CDN46181.1 | CDN46179.1 | BN871_LG_00050 | BN871_LG_00030 | Hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; Product derived from UniProtKB/Trembl:G4HI87; Belongs to the sigma-70 factor family. ECF subfamily. | 0.615 |
CDN46181.1 | CDN46180.1 | BN871_LG_00050 | BN871_LG_00040 | Hypothetical protein. | Uncharacterized protein; Product derived from UniProtKB/Trembl:D3EJI9. | 0.615 |
CDN46181.1 | CDN46182.1 | BN871_LG_00050 | BN871_LG_00060 | Hypothetical protein. | Hypothetical protein. | 0.524 |
CDN46181.1 | yvaA | BN871_LG_00050 | BN871_LG_00010 | Hypothetical protein. | Uncharacterized oxidoreductase YvaA; Product derived from UniProtKB/Swiss-Prot:O32223;Gene name derived from UniProtKB/Swiss-Prot:O32223;EC number derived from UniProtKB/Swiss-Prot:O32223. | 0.580 |
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