STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA51401.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)    
Predicted Functional Partners:
AMA51411.1
Rhamnogalacturonate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.979
AMA51402.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.919
AMA51403.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.826
AMA51404.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.705
AMA54659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.664
AMA53533.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.628
AMA51409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.590
AMA54658.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.561
AMA53403.1
Arabinose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.553
AMA51407.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.550
Your Current Organism:
Bacillus subtilis inaquosorum
NCBI taxonomy Id: 483913
Other names: B. subtilis subsp. inaquosorum, BGSC 3A28, Bacillus subtilis subsp. inaquosorum, Bacillus subtilis subsp. inaquosorum Rooney et al. 2009, DSM 22148, KCTC 13429, NRRL B-23052
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.