STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA51968.1Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)    
Predicted Functional Partners:
AMA51964.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.935
AMA51963.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.902
AMA51962.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.899
AMA51967.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.893
AMA51959.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.862
AMA51958.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.860
AMA51961.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.819
AMA51966.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.819
AMA51971.1
Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.818
AMA51960.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.817
Your Current Organism:
Bacillus subtilis inaquosorum
NCBI taxonomy Id: 483913
Other names: B. subtilis subsp. inaquosorum, BGSC 3A28, Bacillus subtilis subsp. inaquosorum, Bacillus subtilis subsp. inaquosorum Rooney et al. 2009, DSM 22148, KCTC 13429, NRRL B-23052
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.