STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMA52489.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)    
Predicted Functional Partners:
AMA52488.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.876
AMA51550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.868
AMA52492.1
CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.864
tlp
Small, acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family.
 
     0.740
AMA52496.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.738
AMA52707.1
Virulence factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
AMA54270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
sspN
Spore protein N; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspN family.
       0.511
AMA54409.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
AMA51742.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
Your Current Organism:
Bacillus subtilis inaquosorum
NCBI taxonomy Id: 483913
Other names: B. subtilis subsp. inaquosorum, BGSC 3A28, Bacillus subtilis subsp. inaquosorum, Bacillus subtilis subsp. inaquosorum Rooney et al. 2009, DSM 22148, KCTC 13429, NRRL B-23052
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.