STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWX80443.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
KWX80445.1
Glutamine--scyllo-inositol aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.912
KWX80444.1
ROK family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KWX78964.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
KWX75002.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
KWX73416.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.714
KWX70971.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
KWX71083.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.697
KWX80446.1
Fusaricidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
KWX80442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.627
KWX80441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.566
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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