STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWX76170.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
hssR3
Heme transporter CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.960
KWX72198.1
Heme transporter CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.811
KWX78007.1
Heme response regulator HssR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.808
hssR5
Heme response regulator HssR; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.808
KWX80290.1
Heme response regulator HssR; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.803
KWX77695.1
Heme transporter CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.803
hssR1
Heme transporter CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.797
KWX71759.1
Heme transporter CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.775
KWX73057.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.758
KWX78419.1
PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.756
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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