STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWX71755.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)    
Predicted Functional Partners:
KWX70910.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.997
barA
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.994
KWX81059.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.983
KWX80288.1
PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.983
KWX77826.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.978
KWX69370.1
Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.978
KWX80854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.974
KWX77825.1
Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.971
KWX69367.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.962
fliG
Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.959
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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