Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KWX69341.1 | KWX69342.1 | AMQ84_30545 | AMQ84_30550 | HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.555 |
KWX69341.1 | yqiG | AMQ84_30545 | AMQ84_30540 | HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
KWX69342.1 | KWX69341.1 | AMQ84_30550 | AMQ84_30545 | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.555 |
KWX69342.1 | kduD | AMQ84_30550 | AMQ84_24725 | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
KWX69342.1 | kduI | AMQ84_30550 | AMQ84_24715 | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.640 |
KWX69342.1 | yqiG | AMQ84_30550 | AMQ84_30540 | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
kduD | KWX69342.1 | AMQ84_24725 | AMQ84_30550 | 3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
kduD | kduI | AMQ84_24725 | AMQ84_24715 | 3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.993 |
kduI | KWX69342.1 | AMQ84_24715 | AMQ84_30550 | 5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
kduI | kduD | AMQ84_24715 | AMQ84_24725 | 5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
yqiG | KWX69341.1 | AMQ84_30540 | AMQ84_30545 | NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
yqiG | KWX69342.1 | AMQ84_30540 | AMQ84_30550 | NADH-dependent flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |