STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0010Transposase. (107 aa)    
Predicted Functional Partners:
TW91_0353
Transposase.
 
     0.764
TW91_1924
TonB-dependent receptor domain protein.
  
     0.741
TW91_1994
TonB-dependent receptor.
  
     0.640
TW91_0003
Transferrin-binding protein A.
  
    0.633
TW91_0377
Tat pathway signal sequence domain protein.
  
     0.614
TW91_1454
TPR repeat-containing protein.
  
     0.596
TW91_0934
Hypothetical protein.
  
     0.585
TW91_1925
Tat pathway signal sequence domain protein.
  
     0.532
TW91_1230
TonB-dependent receptor protein.
  
     0.502
TW91_1931
Nitrate transport ATP-binding protein NrtC.
  
    0.484
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.