STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0226LysM domain protein. (411 aa)    
Predicted Functional Partners:
TW91_0397
Fimbrial assembly protein PilQ.
 
 
 
 0.960
TW91_0399
Pilus assembly protein, PilO.
  
 
   0.841
TW91_0400
Pilus assembly protein.
  
 
   0.841
TW91_0398
Pilus assembly protein PilP.
  
 
   0.839
PilM
PilM protein.
  
 
   0.835
TW91_1408
Pilus biogenesis protein.
  
    0.772
PilW
Type IV pilus biogenesis/stability protein PilW.
  
     0.763
TW91_0806
Fimbrial protein FimT.
  
     0.688
TW91_0998
Two component sensor kinase.
  
     0.677
TW91_0980
Type IV fimbrial tip adhesin.
  
     0.675
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.