Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
TW91_0287Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (283 aa)    
Predicted Functional Partners:
TW91_0824
Protein RnfH; Belongs to the UPF0125 (RnfH) family.
 
   
 0.775
TW91_0286
Hypothetical protein.
       0.574
TW91_1569
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase.
  
  
 0.558
aat
leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
     
 0.476
nqrE
NADH:ubiquinone oxidoreductase, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.
  
   
 0.472
TW91_0315
Stringent starvation protein B.
  
     0.444
TW91_0288
SEC-C motif domain protein.
       0.442
TW91_1365
Iron-sulfur binding protein.
  
  
 0.436
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.435
TW91_0285
Hypothetical protein.
       0.424
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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