Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| TW91_0286 | TW91_0287 | TW91_0286 | TW91_0287 | Hypothetical protein. | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.574 |
| TW91_0287 | TW91_0286 | TW91_0287 | TW91_0286 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Hypothetical protein. | 0.574 |
| TW91_0287 | TW91_0288 | TW91_0287 | TW91_0288 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | SEC-C motif domain protein. | 0.442 |
| TW91_0287 | TW91_0315 | TW91_0287 | TW91_0315 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Stringent starvation protein B. | 0.444 |
| TW91_0287 | TW91_0824 | TW91_0287 | TW91_0824 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Protein RnfH; Belongs to the UPF0125 (RnfH) family. | 0.772 |
| TW91_0287 | TW91_1365 | TW91_0287 | TW91_1365 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Iron-sulfur binding protein. | 0.523 |
| TW91_0287 | TW91_1535 | TW91_0287 | TW91_1535 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Rubredoxin. | 0.446 |
| TW91_0287 | aat | TW91_0287 | TW91_0463 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.558 |
| TW91_0287 | metG | TW91_0287 | TW91_0663 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.431 |
| TW91_0287 | nqrE | TW91_0287 | TW91_0123 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | NADH:ubiquinone oxidoreductase, E subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | 0.468 |
| TW91_0287 | nth | TW91_0287 | TW91_0924 | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.444 |
| TW91_0288 | TW91_0287 | TW91_0288 | TW91_0287 | SEC-C motif domain protein. | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.442 |
| TW91_0315 | TW91_0287 | TW91_0315 | TW91_0287 | Stringent starvation protein B. | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.444 |
| TW91_0315 | metG | TW91_0315 | TW91_0663 | Stringent starvation protein B. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.627 |
| TW91_0824 | TW91_0287 | TW91_0824 | TW91_0287 | Protein RnfH; Belongs to the UPF0125 (RnfH) family. | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.772 |
| TW91_1365 | TW91_0287 | TW91_1365 | TW91_0287 | Iron-sulfur binding protein. | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.523 |
| TW91_1365 | TW91_1535 | TW91_1365 | TW91_1535 | Iron-sulfur binding protein. | Rubredoxin. | 0.527 |
| TW91_1365 | aat | TW91_1365 | TW91_0463 | Iron-sulfur binding protein. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.514 |
| TW91_1535 | TW91_0287 | TW91_1535 | TW91_0287 | Rubredoxin. | Ferredoxin, 4Fe-4S bacterial type; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.446 |
| TW91_1535 | TW91_1365 | TW91_1535 | TW91_1365 | Rubredoxin. | Iron-sulfur binding protein. | 0.527 |
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