STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OppCOligopeptide transport system permease protein OppC. (302 aa)    
Predicted Functional Partners:
TW91_0336
Oligopeptide/dipeptide transporter, C- region family; Belongs to the ABC transporter superfamily.
 
 0.999
OppB
Oligopeptide transport system permease protein OppB.
 
 0.999
TW91_0340
Periplasmic oligopeptide-binding protein.
 
 
 0.996
TW91_0335
Oligopeptide/dipeptide transporter, C- region family.
 
 0.993
TW91_1405
Oligopeptide/dipeptide transporter, C- region family; Belongs to the ABC transporter superfamily.
 
 0.932
TW91_1420
ABC transporter, permease protein.
  
  0.868
TW91_0350
Spermidine/putrescine ABC transporter, permease protein.
  
 
 0.764
TW91_0904
ABC transporter ATPase TroB.
     
 0.748
TW91_0519
ABC transporter, periplasmic substrate-binding protein.
  
 
 0.714
TW91_0349
Putrescine transport system permease protein PotH.
    
  0.704
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.