STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0371ABC transport ATP-binding protein. (258 aa)    
Predicted Functional Partners:
MlaD
Outer membrane transport protein.
 
 0.999
MlaE
ABC transport inner membrane subunit.
 
 0.999
TW91_0367
Hypothetical protein.
  
 0.953
TW91_0368
Periplasmic transport protein.
 
 
 0.944
TW91_1630
Periplasmic transport protein.
 
 
 0.868
LptB
ABC transporter, ATP-binding protein.
 
 
 
0.608
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.566
TW91_0366
Periplasmic/outer membrane protein.
 
   
 0.539
TW91_0283
Hypothetical protein.
    
  0.520
TW91_0360
ABC-2 type transporter.
    
  0.520
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.