STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0390Lincomycin resistance protein LmrB. (475 aa)    
Predicted Functional Partners:
TW91_0560
Multidrug resistance protein Y.
  
     0.742
TW91_0559
Multidrug resistance protein A.
 
 0.713
TW91_0301
Permease, major facilitator family.
  
   
 0.589
TW91_0389
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
       0.574
TW91_0394
Sensor histidine kinase.
 
     0.545
TW91_0393
DNA-binding response regulator.
     
 0.536
TW91_0392
Flavin reductase.
       0.530
TW91_1392
Type I secretion membrane fusion protein.
   
 0.481
msrA
Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.426
TW91_1464
AcrB protein.
   
 0.403
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.