STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0416HAD-superfamily hydrolase, subfamily IA, variant 1. (131 aa)    
Predicted Functional Partners:
TW91_0418
Pilin glycosylation protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.765
TW91_0417
Formyl transferase family protein.
       0.745
TW91_0415
ATP-grasp domain protein.
 
     0.639
RibD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.532
TW91_0419
Pilin glycosylation protein.
       0.512
TW91_0420
Pilin glycosylation protein.
       0.464
AqpZ
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  0.449
TW91_0414
Glycosyl transferase, group 1 family.
  
 
 0.437
TW91_0413
Glycosyl transferase, group 1 family.
  
 
 0.424
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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