STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0418Pilin glycosylation protein; Belongs to the DegT/DnrJ/EryC1 family. (391 aa)    
Predicted Functional Partners:
TW91_0419
Pilin glycosylation protein.
 
  
 0.926
TW91_0420
Pilin glycosylation protein.
 
  
 0.904
TW91_0415
ATP-grasp domain protein.
   
 0.876
TW91_0417
Formyl transferase family protein.
  
  
 0.846
TW91_0408
WblA protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.792
TW91_0416
HAD-superfamily hydrolase, subfamily IA, variant 1.
       0.758
TW91_0376
Acetyltransferase.
 
  
 0.732
TW91_0577
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.608
TW91_0414
Glycosyl transferase, group 1 family.
 
  
 0.580
TW91_0421
Polysaccharide biosynthesis/export protein.
 
   
 0.564
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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