STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0419Pilin glycosylation protein. (473 aa)    
Predicted Functional Partners:
TW91_0420
Pilin glycosylation protein.
     0.992
TW91_0418
Pilin glycosylation protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.929
TW91_0421
Polysaccharide biosynthesis/export protein.
  
  
 0.800
TW91_0415
ATP-grasp domain protein.
 
     0.728
TW91_0417
Formyl transferase family protein.
       0.521
TW91_0410
Lipopolysaccharide biosynthesis translocase.
 
  
 0.514
TW91_0416
HAD-superfamily hydrolase, subfamily IA, variant 1.
       0.512
TW91_1739
O-antigen polymerase family protein.
  
  
 0.484
TW91_0414
Glycosyl transferase, group 1 family.
 
  
 0.479
TW91_0423
Tyrosine-protein kinase wzc.
  
  
 0.452
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.