STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0421Polysaccharide biosynthesis/export protein. (375 aa)    
Predicted Functional Partners:
TW91_0423
Tyrosine-protein kinase wzc.
 
 
 0.920
TW91_0422
Low molecular weight protein-tyrosine-phosphatase ptp.
 
  
 0.886
TW91_0420
Pilin glycosylation protein.
  
  
 0.831
TW91_0419
Pilin glycosylation protein.
  
  
 0.800
TW91_1727
Outer membrane Protein p.iii.
  
 0.672
TW91_1539
Inner membrane lipoprotein YiaD.
  
 0.657
lptD
LPS-assembly protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
     
 0.624
TW91_0984
Sugar isomerase, KpsF/GutQ family; Belongs to the SIS family. GutQ/KpsF subfamily.
     
 0.623
TW91_1069
Surface antigen family protein.
   
 0.595
TW91_1739
O-antigen polymerase family protein.
  
  
 0.555
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.