Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0437Cytochrome c family protein. (207 aa)    
Predicted Functional Partners:
TW91_0312
Ubiquinol--cytochrome c reductase, cytochrome c1.
 
 
 0.951
PetA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.950
CcoO
Cytochrome c oxidase, Cbb3-type, subunit II.
 
 
 0.921
CcoN
Cytochrome c oxidase, Cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.914
TW91_0454
Cytochrome c oxidase, cbb3-type, subunit III.
 
 
 
 0.912
TW91_0912
Cytochrome c5.
 
 
 
 0.907
TW91_0311
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.869
TW91_1817
Cytochrome C.
 
 
 0.851
TW91_1680
Cytochrome c oxidase, cbb3-type, subunit III.
 
 
 0.833
NirK
Nitrite reductase, copper-containing; Belongs to the multicopper oxidase family.
  
 
 0.828
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.