STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0481Fe-regulated protein B. (700 aa)    
Predicted Functional Partners:
TW91_1454
TPR repeat-containing protein.
  
     0.759
TW91_0944
Integral membrane protein.
  
     0.755
TW91_0936
Hemoglobin-haptoglobin utilization protein B.
  
    0.701
TW91_0934
Hypothetical protein.
  
     0.700
TW91_0512
TPR repeat-containing protein.
  
    0.695
TW91_1604
Universal stress protein UspE.
  
    0.660
TW91_1230
TonB-dependent receptor protein.
  
    0.652
TW91_1466
Integral membrane protein.
  
     0.647
TW91_0482
iron(III) dicitrate transport ATP-binding protein fecE.
 
    0.632
TW91_1029
TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.625
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.