STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0519ABC transporter, periplasmic substrate-binding protein. (593 aa)    
Predicted Functional Partners:
TW91_1420
ABC transporter, permease protein.
 
 
 0.953
TW91_1421
ABC transporter, permease protein.
 
 
 0.917
TW91_1422
ABC transporter, permease protein.
 
 
 0.908
potA
Putrescine ABC transporter, ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
   
 
 0.872
OppB
Oligopeptide transport system permease protein OppB.
  
 
 0.793
TW91_1405
Oligopeptide/dipeptide transporter, C- region family; Belongs to the ABC transporter superfamily.
 
 
 0.789
TW91_0740
L-cystine transport system permease protein TcyB.
   
 
  0.770
TW91_0380
Polar amino acid ABC transporter, inner membrane subunit.
   
 
  0.746
OppC
Oligopeptide transport system permease protein OppC.
  
 
 0.714
TW91_0336
Oligopeptide/dipeptide transporter, C- region family; Belongs to the ABC transporter superfamily.
 
 
 0.683
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.