Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0526Hypothetical protein. (124 aa)    
Predicted Functional Partners:
TW91_1144
Hypothetical protein.
  
     0.748
TW91_1047
Hypothetical protein.
 
     0.727
TW91_1912
Hypothetical protein.
  
     0.642
TW91_0879
protein-L-isoaspartate O-methyltransferase.
  
    0.614
TW91_0072
Hypothetical protein.
  
     0.575
TW91_0527
Homoserine dehydrogenase.
       0.535
TW91_1844
BFD-like [2Fe-2S] binding domain protein.
  
     0.520
TW91_0528
Putative membrane protein.
       0.491
TW91_0525
Transposase.
       0.428
TW91_0318
Hypothetical protein.
  
     0.421
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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