STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0587Permease. (509 aa)    
Predicted Functional Partners:
TW91_0700
Thiamin-binding periplasmic protein.
 
 
 0.974
TW91_1081
Spermidine/putrescine import ATP-binding protein PotA.
 
 0.951
potA
Putrescine ABC transporter, ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.777
TW91_0585
Cytochrome B561.
       0.564
TW91_0586
Hypothetical protein.
       0.559
TW91_1710
Hypothetical protein.
  
     0.533
TW91_0588
Hypoxanthine phosphoribosyltransferase.
       0.508
TW91_1318
Periplasmic protein.
  
     0.503
TW91_0540
Secreted protein.
  
     0.457
TW91_1739
O-antigen polymerase family protein.
  
     0.456
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.