Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0642Hypothetical protein. (1175 aa)    
Predicted Functional Partners:
TW91_0641
Hypothetical protein.
     0.993
TW91_0639
Outer membrane protein, OMP85 family.
 
 
 0.982
TW91_1639
Hypothetical protein.
  
     0.763
TW91_1739
O-antigen polymerase family protein.
  
     0.762
TW91_1318
Periplasmic protein.
 
   
 0.751
TW91_1552
Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.738
TW91_1710
Hypothetical protein.
 
     0.732
LptC
Hypothetical protein.
  
     0.723
TW91_1396
Hypothetical protein.
  
     0.716
TW91_1700
Hypothetical protein.
  
   
 0.715
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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