| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RecQ | TW91_1349 | TW91_0649 | TW91_1349 | ATP-dependent DNA helicase RecQ. | Dead/deah box helicase; Belongs to the DEAD box helicase family. | 0.911 |
| RecQ | TW91_1918 | TW91_0649 | TW91_1918 | ATP-dependent DNA helicase RecQ. | Dead/deah box helicase; Belongs to the DEAD box helicase family. | 0.915 |
| RecQ | polA | TW91_0649 | TW91_0167 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.988 |
| RecQ | recA | TW91_0649 | TW91_1271 | ATP-dependent DNA helicase RecQ. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.974 |
| RecQ | rnr | TW91_0649 | TW91_0857 | ATP-dependent DNA helicase RecQ. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.902 |
| RecQ | rph | TW91_0649 | TW91_1980 | ATP-dependent DNA helicase RecQ. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.982 |
| RecQ | rpoZ | TW91_0649 | TW91_1888 | ATP-dependent DNA helicase RecQ. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.902 |
| RecQ | rpsD | TW91_0649 | TW91_0043 | ATP-dependent DNA helicase RecQ. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.913 |
| RecQ | rsmA | TW91_0649 | TW91_1584 | ATP-dependent DNA helicase RecQ. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.943 |
| RecQ | topA | TW91_0649 | TW91_0216 | ATP-dependent DNA helicase RecQ. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.988 |
| TW91_1349 | RecQ | TW91_1349 | TW91_0649 | Dead/deah box helicase; Belongs to the DEAD box helicase family. | ATP-dependent DNA helicase RecQ. | 0.911 |
| TW91_1349 | rpsD | TW91_1349 | TW91_0043 | Dead/deah box helicase; Belongs to the DEAD box helicase family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.654 |
| TW91_1918 | RecQ | TW91_1918 | TW91_0649 | Dead/deah box helicase; Belongs to the DEAD box helicase family. | ATP-dependent DNA helicase RecQ. | 0.915 |
| TW91_1918 | rpsD | TW91_1918 | TW91_0043 | Dead/deah box helicase; Belongs to the DEAD box helicase family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.654 |
| polA | RecQ | TW91_0167 | TW91_0649 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | ATP-dependent DNA helicase RecQ. | 0.988 |
| polA | recA | TW91_0167 | TW91_1271 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.982 |
| polA | rnr | TW91_0167 | TW91_0857 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.614 |
| polA | rpoZ | TW91_0167 | TW91_1888 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.589 |
| polA | topA | TW91_0167 | TW91_0216 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.907 |
| recA | RecQ | TW91_1271 | TW91_0649 | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | ATP-dependent DNA helicase RecQ. | 0.974 |