STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_0864Transcriptional regulator, AraC family. (328 aa)    
Predicted Functional Partners:
TW91_0865
Beta-lactamase fold protein.
 
   
 0.788
TW91_1309
AraC-family transcriptional regulator.
  
     0.589
RpoA
DNA-directed RNA polymerase, alpha subunit.
    
 
 0.516
TW91_0151
Transcriptional regulator, TetR family.
  
   
 0.455
TW91_0456
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
  
 0.448
TW91_0433
RarD protein.
  
     0.411
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.