STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TW91_0952Bacterial extracellular solute-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (381 aa)    
Predicted Functional Partners:
TW91_0350
Spermidine/putrescine ABC transporter, permease protein.
 
 0.996
TW91_0349
Putrescine transport system permease protein PotH.
 
  
 0.917
potA
Putrescine ABC transporter, ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.857
TW91_1081
Spermidine/putrescine import ATP-binding protein PotA.
 
 
 0.553
TW91_0953
ACT domain-containing protein; Belongs to the UPF0237 family.
       0.516
TW91_0954
Hypothetical protein.
       0.491
TW91_0351
Gamma-glutamylputrescine oxidoreductase.
 
   
 0.449
TW91_1216
Lipoprotein.
      
 0.426
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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