Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LptB | LptC | TW91_0989 | TW91_0987 | ABC transporter, ATP-binding protein. | Hypothetical protein. | 0.999 |
| LptB | RpoN | TW91_0989 | TW91_0990 | ABC transporter, ATP-binding protein. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.497 |
| LptB | TW91_0984 | TW91_0989 | TW91_0984 | ABC transporter, ATP-binding protein. | Sugar isomerase, KpsF/GutQ family; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.806 |
| LptB | TW91_0986 | TW91_0989 | TW91_0986 | ABC transporter, ATP-binding protein. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase. | 0.715 |
| LptB | WaaF | TW91_0989 | TW91_1657 | ABC transporter, ATP-binding protein. | Lipopolysaccharide heptosyltransferase II. | 0.420 |
| LptB | lptA | TW91_0989 | TW91_0988 | ABC transporter, ATP-binding protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.985 |
| LptB | lptD | TW91_0989 | TW91_1111 | ABC transporter, ATP-binding protein. | LPS-assembly protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.444 |
| LptC | LptB | TW91_0987 | TW91_0989 | Hypothetical protein. | ABC transporter, ATP-binding protein. | 0.999 |
| LptC | RpoN | TW91_0987 | TW91_0990 | Hypothetical protein. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.497 |
| LptC | TW91_0984 | TW91_0987 | TW91_0984 | Hypothetical protein. | Sugar isomerase, KpsF/GutQ family; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.830 |
| LptC | TW91_0986 | TW91_0987 | TW91_0986 | Hypothetical protein. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase. | 0.901 |
| LptC | lptA | TW91_0987 | TW91_0988 | Hypothetical protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.983 |
| LptC | lptD | TW91_0987 | TW91_1111 | Hypothetical protein. | LPS-assembly protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.681 |
| LptC | lptE | TW91_0987 | TW91_1261 | Hypothetical protein. | Lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. | 0.819 |
| RpoN | LptB | TW91_0990 | TW91_0989 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | ABC transporter, ATP-binding protein. | 0.497 |
| RpoN | LptC | TW91_0990 | TW91_0987 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.497 |
| RpoN | TW91_0984 | TW91_0990 | TW91_0984 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sugar isomerase, KpsF/GutQ family; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.433 |
| RpoN | TW91_0986 | TW91_0990 | TW91_0986 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase. | 0.449 |
| RpoN | lptA | TW91_0990 | TW91_0988 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.486 |
| TW91_0984 | LptB | TW91_0984 | TW91_0989 | Sugar isomerase, KpsF/GutQ family; Belongs to the SIS family. GutQ/KpsF subfamily. | ABC transporter, ATP-binding protein. | 0.806 |
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