| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RaiA | RpoN | TW91_0992 | TW91_0990 | Ribosomal subunit interface protein. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.718 |
| RaiA | TW91_0991 | TW91_0992 | TW91_0991 | Ribosomal subunit interface protein. | RNA polymerase sigma-54 factor. | 0.718 |
| RpoA | RpoN | TW91_0044 | TW91_0990 | DNA-directed RNA polymerase, alpha subunit. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.781 |
| RpoA | TW91_0773 | TW91_0044 | TW91_0773 | DNA-directed RNA polymerase, alpha subunit. | DNA-directed RNA polymerase, beta' subunit. | 0.982 |
| RpoA | TW91_0991 | TW91_0044 | TW91_0991 | DNA-directed RNA polymerase, alpha subunit. | RNA polymerase sigma-54 factor. | 0.781 |
| RpoA | rpoB | TW91_0044 | TW91_0775 | DNA-directed RNA polymerase, alpha subunit. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| RpoA | rpoC | TW91_0044 | TW91_0772 | DNA-directed RNA polymerase, alpha subunit. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
| RpoA | rpoZ | TW91_0044 | TW91_1888 | DNA-directed RNA polymerase, alpha subunit. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.995 |
| RpoN | RaiA | TW91_0990 | TW91_0992 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal subunit interface protein. | 0.718 |
| RpoN | RpoA | TW91_0990 | TW91_0044 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, alpha subunit. | 0.781 |
| RpoN | TW91_0773 | TW91_0990 | TW91_0773 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta' subunit. | 0.675 |
| RpoN | TW91_0991 | TW91_0990 | TW91_0991 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma-54 factor. | 0.994 |
| RpoN | TW91_0998 | TW91_0990 | TW91_0998 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two component sensor kinase. | 0.907 |
| RpoN | TW91_0999 | TW91_0990 | TW91_0999 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Type 4 fimbriae expression regulatory protein PilR. | 0.790 |
| RpoN | ribB | TW91_0990 | TW91_1386 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.546 |
| RpoN | rpoB | TW91_0990 | TW91_0775 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.793 |
| RpoN | rpoC | TW91_0990 | TW91_0772 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.675 |
| RpoN | rpoZ | TW91_0990 | TW91_1888 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.768 |
| TW91_0773 | RpoA | TW91_0773 | TW91_0044 | DNA-directed RNA polymerase, beta' subunit. | DNA-directed RNA polymerase, alpha subunit. | 0.982 |
| TW91_0773 | RpoN | TW91_0773 | TW91_0990 | DNA-directed RNA polymerase, beta' subunit. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.675 |
