STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1102Transcriptional regulator, XRE family. (98 aa)    
Predicted Functional Partners:
TW91_1951
Hypothetical protein.
  
     0.769
TW91_1428
Tetraacyldisaccharide 4'-kinase.
  
     0.749
slyX
Hypothetical protein; Belongs to the SlyX family.
  
   
 0.702
TW91_2007
TPR repeat region family protein.
  
     0.680
TW91_0792
Hypothetical protein.
  
     0.651
TW91_0374
Inner membrane protein.
  
     0.649
TW91_1757
Hypothetical protein.
  
     0.645
lptE
Lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
     0.638
TW91_1451
Inner membrane protein.
  
    0.631
TW91_0085
HesA/MoeB/ThiF family protein.
   
 
 0.611
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.