Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FabD | TW91_1248 | TW91_0261 | TW91_1248 | Malonyl CoA-acyl carrier protein transacylase. | AMP-binding enzyme. | 0.901 |
| FabD | msbA | TW91_0261 | TW91_1214 | Malonyl CoA-acyl carrier protein transacylase. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.617 |
| MlaE | TW91_0284 | TW91_0370 | TW91_0284 | ABC transport inner membrane subunit. | ABC transporter, ATP-binding protein. | 0.643 |
| MlaE | msbA | TW91_0370 | TW91_1214 | ABC transport inner membrane subunit. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.733 |
| TW91_0284 | MlaE | TW91_0284 | TW91_0370 | ABC transporter, ATP-binding protein. | ABC transport inner membrane subunit. | 0.643 |
| TW91_0284 | msbA | TW91_0284 | TW91_1214 | ABC transporter, ATP-binding protein. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.596 |
| TW91_0284 | msrA | TW91_0284 | TW91_0673 | ABC transporter, ATP-binding protein. | Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.478 |
| TW91_1213 | msbA | TW91_1213 | TW91_1214 | ferredoxin--NADP reductase. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.555 |
| TW91_1213 | msrA | TW91_1213 | TW91_0673 | ferredoxin--NADP reductase. | Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.540 |
| TW91_1248 | FabD | TW91_1248 | TW91_0261 | AMP-binding enzyme. | Malonyl CoA-acyl carrier protein transacylase. | 0.901 |
| TW91_1248 | TW91_1690 | TW91_1248 | TW91_1690 | AMP-binding enzyme. | Hypothetical protein. | 0.766 |
| TW91_1248 | dnaK | TW91_1248 | TW91_0941 | AMP-binding enzyme. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.631 |
| TW91_1248 | hscA | TW91_1248 | TW91_2027 | AMP-binding enzyme. | Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.631 |
| TW91_1248 | msbA | TW91_1248 | TW91_1214 | AMP-binding enzyme. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.667 |
| TW91_1248 | msrA | TW91_1248 | TW91_0673 | AMP-binding enzyme. | Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.806 |
| TW91_1248 | parE | TW91_1248 | TW91_0950 | AMP-binding enzyme. | DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. | 0.789 |
| TW91_1690 | TW91_1248 | TW91_1690 | TW91_1248 | Hypothetical protein. | AMP-binding enzyme. | 0.766 |
| TW91_1690 | dnaK | TW91_1690 | TW91_0941 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.496 |
| TW91_1690 | hscA | TW91_1690 | TW91_2027 | Hypothetical protein. | Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.496 |
| TW91_1690 | msbA | TW91_1690 | TW91_1214 | Hypothetical protein. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.620 |
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