STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1228Glycosyl transferase, group 2 family. (241 aa)    
Predicted Functional Partners:
TW91_1227
Lipid A biosynthesis acyltransferase.
     0.994
TW91_1226
Thioesterase family protein.
 
     0.926
TW91_1250
Integral membrane protein.
 
     0.822
TW91_1253
Phospholipid/glycerol acyltransferase.
 
     0.818
TW91_1248
AMP-binding enzyme.
 
   
 0.816
TW91_1254
Hypothetical protein.
 
     0.816
TW91_1252
Acyl carrier protein.
 
   0.811
TW91_1519
Putative membrane protein.
 
    0.810
TW91_1251
Acyl carrier protein.
 
   0.809
TW91_1514
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
    0.803
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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