Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TW91_1275Periplasmic protein. (636 aa)    
Predicted Functional Partners:
TW91_1527
Carboxy--processing protease; Belongs to the peptidase S41A family.
 
 
 0.752
LolB
Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
 
    0.694
TW91_1277
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase.
       0.623
TW91_1274
Nudix hydrolase.
       0.534
TW91_0803
Type IV pilus assembly protein PilX.
  
     0.512
TW91_1318
Periplasmic protein.
 
  
 0.505
TW91_0998
Two component sensor kinase.
  
  
 0.463
TW91_0796
Acetyltransferase, gnat family.
  
     0.461
TW91_1112
Phosphotransferase family protein.
  
     0.447
TW91_0220
Two-component sensor.
  
     0.443
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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