Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FolK | coaX | TW91_1848 | TW91_0498 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.417 |
| FolK | hfq | TW91_1848 | TW91_1851 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.437 |
| FolK | pcnB | TW91_1848 | TW91_1321 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.773 |
| TW91_0315 | ftsB | TW91_0315 | TW91_1145 | Stringent starvation protein B. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.645 |
| TW91_0315 | metG | TW91_0315 | TW91_0663 | Stringent starvation protein B. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.627 |
| TW91_0315 | pcnB | TW91_0315 | TW91_1321 | Stringent starvation protein B. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.519 |
| TW91_0759 | pcnB | TW91_0759 | TW91_1321 | D-alanyl-D-alanine carboxypeptidase DacC; Belongs to the peptidase S11 family. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.608 |
| TW91_1573 | pcnB | TW91_1573 | TW91_1321 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.514 |
| coaX | FolK | TW91_0498 | TW91_1848 | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. | 0.417 |
| coaX | dapB | TW91_0498 | TW91_0466 | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.595 |
| coaX | hfq | TW91_0498 | TW91_1851 | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.472 |
| coaX | metG | TW91_0498 | TW91_0663 | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.633 |
| coaX | pcnB | TW91_0498 | TW91_1321 | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.569 |
| dapB | coaX | TW91_0466 | TW91_0498 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | Bifunctional enzyme BirA/coaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. | 0.595 |
| dapB | metG | TW91_0466 | TW91_0663 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.695 |
| dapB | pcnB | TW91_0466 | TW91_1321 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.707 |
| ftsB | TW91_0315 | TW91_1145 | TW91_0315 | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | Stringent starvation protein B. | 0.645 |
| ftsB | metG | TW91_1145 | TW91_0663 | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.419 |
| ftsB | pcnB | TW91_1145 | TW91_1321 | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.538 |
| hfq | FolK | TW91_1851 | TW91_1848 | Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. | 0.437 |
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