Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glgB4-alpha-glucanotransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (1428 aa)    
Predicted Functional Partners:
GlgX
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
0.999
TW91_1382
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.999
TW91_0742
Amylosucrase.
 
  
 0.909
AdhE
Aldehyde-alcohol dehydrogenase 2.
  
 
 0.777
TW91_0413
Glycosyl transferase, group 1 family.
   
 0.733
TW91_0414
Glycosyl transferase, group 1 family.
   
 0.733
TW91_0507
Lipooligosaccharide glycosyl transferase G.
   
 0.733
TW91_1869
Glycosyl transferase.
   
 0.733
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
  
 0.711
TW91_1556
NADP-dependent malic enzyme.
     
 0.672
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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