Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TW91_1393ABC transporter family protein. (738 aa)    
Predicted Functional Partners:
TW91_1392
Type I secretion membrane fusion protein.
  
 0.905
TW91_1394
Outer membrane efflux protein.
 
     0.900
TW91_0362
Outer membrane efflux protein.
 
     0.773
TW91_1585
Glutamine transport ATP-binding protein GlnQ.
 
     
0.604
TW91_0011
Putative RTX toxins and related Ca2+-binding protein.
  
     0.567
TW91_1965
Hypothetical protein.
 
    0.535
TW91_0843
Bifunctional hemolysin/adenylate cyclase.
  
     0.527
TW91_1499
Bifunctional hemolysin/adenylate cyclase.
  
     0.527
msrA
Peptide methionine sulfoxide reductase MsrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 0.495
TW91_1772
Putative membrane protein.
  
 
 0.493
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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