STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1393ABC transporter family protein. (738 aa)    
Predicted Functional Partners:
TW91_1392
Type I secretion membrane fusion protein.
  
 0.908
TW91_1394
Outer membrane efflux protein.
 
     0.901
TW91_0362
Outer membrane efflux protein.
 
     0.773
TW91_1585
Glutamine transport ATP-binding protein GlnQ.
 
   
 
0.738
TW91_0739
ATP-binding protein.
 
   
 
0.663
TW91_1772
Putative membrane protein.
  
 
 0.644
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
   
 
0.592
TW91_0011
Putative RTX toxins and related Ca2+-binding protein.
  
     0.567
TW91_0283
Hypothetical protein.
  
 
 0.567
TW91_0360
ABC-2 type transporter.
  
 
 0.567
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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