STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1394Outer membrane efflux protein. (409 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 0.970
TW91_1392
Type I secretion membrane fusion protein.
 
 0.948
TW91_1393
ABC transporter family protein.
 
     0.901
TW91_0559
Multidrug resistance protein A.
  
 0.746
TW91_0361
ABC transporter family protein.
 
     0.718
TW91_1463
Acriflavine resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.591
TW91_1792
Auxiliary transport protein, membrane fusion protein family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.591
TW91_1069
Surface antigen family protein.
  
  0.516
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
   
 0.512
TW91_1829
Porin, major outer membrane protein P.I.
  
  
  0.447
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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