STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1408Pilus biogenesis protein. (117 aa)    
Predicted Functional Partners:
TW91_1407
Hydrolase, TatD family.
  
    0.835
TW91_1409
DNA polymerase III subunit delta'.
     
 0.826
TW91_0398
Pilus assembly protein PilP.
  
   
 0.797
TW91_0400
Pilus assembly protein.
  
   
 0.793
TW91_0974
Type IV-A pilus assembly ATPase PilB.
  
 
 
 0.790
TW91_0399
Pilus assembly protein, PilO.
  
   
 0.786
PilM
PilM protein.
  
   
 0.777
TW91_0226
LysM domain protein.
  
    0.774
PilW
Type IV pilus biogenesis/stability protein PilW.
  
   
 0.723
TW91_0397
Fimbrial assembly protein PilQ.
  
   
 0.715
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.