STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1418Cation uptake regulator; Belongs to the Fur family. (157 aa)    
Predicted Functional Partners:
TW91_1419
CobW/P47K family protein.
 
  
 0.872
TW91_0904
ABC transporter ATPase TroB.
  
  
 0.726
TW91_0905
Putative membrane protein.
 
  
 0.681
TW91_1420
ABC transporter, permease protein.
       0.658
TW91_0906
Periplasmic binding protein MntC; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.605
TW91_1417
NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.574
TW91_1535
Rubredoxin.
  
  
 0.558
TW91_1421
ABC transporter, permease protein.
       0.530
TW91_1422
ABC transporter, permease protein.
       0.530
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.508
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.