Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TW91_1464AcrB protein. (1071 aa)    
Predicted Functional Partners:
TW91_1463
Acriflavine resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.999
TW91_1465
Outer membrane protein OprM.
 0.999
TW91_0558
Putative outer membrane multidrug resistance lipoprotein.
 0.960
TW91_1792
Auxiliary transport protein, membrane fusion protein family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.930
TW91_1790
TolC protein.
 
 0.803
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   
 0.786
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
    
 
 0.766
TW91_1462
HTH-type transcriptional regulator MtrR.
     
 0.692
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.691
TW91_0559
Multidrug resistance protein A.
 
   
 0.647
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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