STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1499Bifunctional hemolysin/adenylate cyclase. (1017 aa)    
Predicted Functional Partners:
TW91_1392
Type I secretion membrane fusion protein.
 
  
 0.671
TW91_1498
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.572
TW91_1497
DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.569
TW91_1393
ABC transporter family protein.
  
     0.527
TW91_0361
ABC transporter family protein.
  
     0.508
trpF
N-(5'phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family.
       0.484
TW91_1965
Hypothetical protein.
 
  
0.443
TW91_1501
Hypothetical protein.
       0.417
TW91_1502
Hypothetical protein.
       0.417
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.