STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TW91_1612Hypothetical protein. (233 aa)    
Predicted Functional Partners:
TW91_0788
Lipase/acylhydrolase family protein.
   
 
 0.578
TW91_1618
Periplasmic protein.
   
 
 0.578
TW91_1239
Periplasmic protein.
   
    0.493
TW91_1240
Periplasmic protein.
   
    0.493
TW91_1609
Exodeoxyribonuclease V, beta subunit; Belongs to the helicase family. UvrD subfamily.
       0.481
TW91_1610
Exodeoxyribonuclease V, beta subunit; Belongs to the helicase family. UvrD subfamily.
       0.481
TW91_1611
Exodeoxyribonuclease V, beta subunit; Belongs to the helicase family. UvrD subfamily.
       0.481
RecB
Exodeoxyribonuclease V beta chain.
       0.467
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
 0.447
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.438
Your Current Organism:
Neisseria flavescens
NCBI taxonomy Id: 484
Other names: ATCC 13120, CCUG 17913, CCUG 345, CIP 73.15, DSM 17633, LMG 5297, LMG:5297, NCTC 8263
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